[apply_patch] freeform apply_patch tool (#2576)

## Summary
GPT-5 introduced the concept of [custom
tools](https://platform.openai.com/docs/guides/function-calling#custom-tools),
which allow the model to send a raw string result back, simplifying
json-escape issues. We are migrating gpt-5 to use this by default.

However, gpt-oss models do not support custom tools, only normal
functions. So we keep both tool definitions, and provide whichever one
the model family supports.

## Testing
- [x] Tested locally with various models
- [x] Unit tests pass

codex-rs/core/src/conversation_history.rs

@@ -110,6 +110,8 @@ fn is_api_message(message: &ResponseItem) -> bool {
         ResponseItem::Message { role, .. } => role.as_str() != "system",
         ResponseItem::FunctionCallOutput { .. }
         | ResponseItem::FunctionCall { .. }
+        | ResponseItem::CustomToolCall { .. }
+        | ResponseItem::CustomToolCallOutput { .. }
         | ResponseItem::LocalShellCall { .. }
         | ResponseItem::Reasoning { .. } => true,
         ResponseItem::Other => false,